Changeset 31511 for trunk/ippScripts/scripts/lap_science.pl

Timestamp:

May 10, 2011, 1:51:21 PM (15 years ago)

Author:

watersc1

Message:

Update laptool_definerun to not attempt to define two rows for the same exp_id. Speed up laptool_exposures, as well as add better quality handling for lap_science.pl

File:

• trunk/ippScripts/scripts/lap_science.pl (modified) (1 diff)

trunk/ippScripts/scripts/lap_science.pl

@@ -474 +474 @@
             $exposure = remake_this_exposure($exposure);
         }
-        if ($exposure->{cam_quality}) {
-            $needs_qstack = 1;
-            $needs_something_private = 1;
-            if ($companion) {
-                $companion->{private} = 1;
-                $companion->{pairwise} = 0;
-                &update_this_exposure($companion);
+        # Do quality checks here
+        if ((($exposure->{chipRun_state} eq 'full')&&($exposure->{chip_bad_quality} / $exposure->{chip_component_count} > 0.05)) ||
+            (($exposure->{camRun_state} eq 'full')&&($exposure->{cam_bad_quality} / $exposure->{cam_component_count} > 0)) ||
+            (($exposure->{warpRun_state} eq 'full')&&($exposure->{warp_bad_quality} / $exposure->{warp_component_count} > 0.2)) ||
+            (($exposure->{diffRun_state} eq 'full')&&($exposure->{diff_bad_quality} / $exposure->{diff_component_count} > 0.5)))  {
+            printf( "QUALITY: $exposure->{exp_id} has bad quality fractions: chip: %d/%d cam: %d/%d warp: %d/%d diff: %d/%d\n",
+                    $exposure->{chip_bad_quality} , $exposure->{chip_component_count},
+                    $exposure->{cam_bad_quality} , $exposure->{cam_component_count},
+                    $exposure->{warp_bad_quality} , $exposure->{warp_component_count},
+                    $exposure->{diff_bad_quality} , $exposure->{diff_component_count});
+
+            unless ($exposure->{diffRun_state} eq 'full') {
+                $needs_qstack = 1;
+                $needs_something_private = 1;
+                if ($companion) {
+                    $companion->{private} = 1;
+                    $companion->{pairwise} = 0;
+                    &update_this_exposure($companion);
+                }
+                $exposure->{private} = 1;
+                $exposure->{pairwise} = 0;
             }
-            $exposure->{private} = 1;
-            $exposure->{pairwise} = 0;
             $exposure->{data_state} = 'drop';
             &update_this_exposure($exposure);
 
         }
-#       if ($companion) { # Validate that there are no problems with the companion exposure
-#           if ($companion->{cam_quality}) { # Maybe other things here?
-#               $exposure->{private} = 1;
-#               $exposure->{data_state} = 'drop';
-#               &update_this_exposure($exposure);
-#               $needs_qstack = 1;
-#           }
-#       }
+
         if  ($exposure->{data_state} eq 'drop') { # This exposure is impossible, so fudge the counts so we get through.
             $can_qstack ++;