Changeset 8998 for trunk/ippScripts/scripts/detrend_calc_norm.pl

Timestamp:

Sep 26, 2006, 3:37:34 PM (20 years ago)

Author:

Paul Price

Message:

Reforming to use IPC::Run instead of IPC::Cmd, since we can feed input
into ppNormCalc's stdin. This saves us writing another file. Needs
testing!

File:

• trunk/ippScripts/scripts/detrend_calc_norm.pl (modified) (5 diffs)

trunk/ippScripts/scripts/detrend_calc_norm.pl

@@ -4 +4 @@
 use strict;
 
-use IPC::Cmd qw( can_run run );
+use IPC::Cmd qw( can_run );
+use IPC::Run qw ( run );
 use PS::IPP::Metadata::Config;
 use PS::IPP::Metadata::List qw( parse_md_list );
@@ -13 +14 @@
 
 
-use constant STATISTIC => 'bg'; # Background statistic to use from the database
-
 # Parse command-line arguments
-my ($detId,   # Detrend id
-    $iter      # Iteration
+my ($detId,                     # Detrend id
+    $iter,                      # Iteration
+    $camera,                    # Camera name
+    $detType                    # Detrend type
     );
 GetOptions(
         'det_id|d=s'    => \$detId,
         'iteration|i=s' => \$iter,
+        'camera|c=s'    => \$camera,
+        'det_type|t=s'  => \$detType
         ) or pod2usage( 2 );
 
 pod2usage( -msg => "Unknown option: @ARGV", -exitval => 2 ) if @ARGV;
-pod2usage( -msg => "Required options --det_id --iteration",
+pod2usage( -msg => "Required options --det_id --iteration --camera --det_type",
            -exitval => 3,
-         ) unless defined $detId
-              and defined $iter;
+           ) unless defined $detId
+    and defined $iter
+    and defined $camera
+    and defined $detType;
 
 
@@ -45 +50 @@
 {
     my $command = "$dettool -processed -unmask -det_id $detId -iteration $iter"; # Command to run
-    my ( $success, $error_code, $full_buf, $stdout_buf, $stderr_buf ) =
-        run(command => $command, verbose => 1);
-    die "Unable to perform dettool -processed -unmask on detrend $detId/$iter: $error_code\n"
-        if not $success;
+    my @command = split /\s+/, $command;
+    my ( $stdin, $stdout, $stderr ); # Buffers for running program
+    run \@command, \$stdin, \$stdout, \$stderr or
+        die "Unable to perform dettool -processed -unmask on detrend $detId/$iter: $?";
     
     # Parse the output
-    my $metadata = $mdcParser->parse(join "", @$stdout_buf)
+    my $metadata = $mdcParser->parse(join "", @$stdout)
         or die "unable to parse metadata config doc";
     $files = parse_md_list($metadata);
@@ -67 +72 @@
 }
 
-my $normName = 'normCalc_' . $detId . '_' . $iter . '.mdc'; # Name for ppNormCalc input file
-my $normFile;                   # File handle for ppNormCalc input
-open $normFile, ">" . $normName;
+# Generate the input for ppNormCalc
+my $normData;                   # Normalisation data
 foreach my $expId (keys %matrix) {
-    print $normFile "$expId\tMETADATA\n";
+    $normData .= "$expId\tMETADATA\n";
     foreach my $classId (keys %{$matrix{$expId}}) {
-        print $normFile "\t" . $classId . "\tF32\t" . $matrix{$expId}->{$classId} . "\n";
+        $normData .= "\t" . $classId . "\tF32\t" . $matrix{$expId}->{$classId} . "\n";
     }
-    print $normFile "END\n\n";
+    $normData .= "END\n\n";
 }
-close $normFile;
 
 # Run ppNormCalc
 my $norms;
 {
-    my $command = "$ppNormCalc $normName"; # Command to run
-    my ( $success, $error_code, $full_buf, $stdout_buf, $stderr_buf ) =
-        run(command => $command, verbose => 1);
-    die "Unable to perform ppNormCalc: $error_code\n"
-        if not $success;
-    $norms = $mdcParser->parse(join "", @$stdout_buf)
+    my ( $stdout, $stderr ); # Buffers for running program
+    my @command = split /\s+/, $ppNormCalc;
+    run \@command, \$normData, \$stdout, \$stderr or
+        die "Unable to perform ppNormCalc: $?";
+
+    # Parse the output
+    $norms = $mdcParser->parse(join "", @$stdout)
         or die "unable to parse metadata config doc";
 }
@@ -99 +103 @@
         my $command = "$dettool -addnormstat -det_id $detId -iteration $iter -class_id $className ".
             "-norm $normalisation"; # Command to run
-        my ( $success, $error_code, $full_buf, $stdout_buf, $stderr_buf ) =
-            run(command => $command, verbose => 1);
-        die "Unable to perform dettool -addnormstat: $error_code\n"
-            if not $success;
+        my @command = split /\s+/, $command;
+
+        my ( $stdin, $stdout, $stderr ); # Buffers for running program
+        run \@command, \$stdin, \$stdout, \$stderr or
+            die "Unable to perform dettool -addnormstat for $className: $?";
     }
 }