Changeset 8983 for trunk/ippScripts/scripts/phase0imfile.pl

Timestamp:

Sep 26, 2006, 10:38:47 AM (20 years ago)

Author:

Paul Price

Message:

Changes so that it will work with ISP data, with only a single imfile. The main change is that bg_stdev is undef when there's a single imfile, so that we need to explicitly check for that case, and set it to zero, otherwise the binaries barf due to bad command-line arguments.

File:

• trunk/ippScripts/scripts/phase0imfile.pl (modified) (1 diff)

trunk/ippScripts/scripts/phase0imfile.pl

@@ -103 +103 @@
         $command .= " " . VARIABLES->{$variable} . " " . ($stats->data($variable))->{mean};
     }
-    
+
     $command .= " " . P0TOOL_BG_MEAN() . " " . $stats->bg_mean();
-    $command .= " " . P0TOOL_BG_STDEV() . " " . $stats->bg_stdev();
+    if (defined($stats->bg_stdev())) {
+        $command .= " " . P0TOOL_BG_STDEV() . " " . $stats->bg_stdev();
+    } else {
+        # Will not be defined if there is only a single imfile
+        $command .= " " . P0TOOL_BG_STDEV() . " 0";
+    }
     $command .= " " . P0TOOL_BG_MEAN_STDEV() . " " . $stats->bg_mean_stdev();