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Changes between Initial Version and Version 1 of Timing_tests


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Timestamp:
Feb 24, 2009, 4:23:58 PM (17 years ago)
Author:
trac
Comment:

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  • Timing_tests

    v1 v1  
     1I ran a series of timing tests of alala with a randome Essence image.  I was looking at the variation of the different psphot steps with the total number of objects.  The question of interest here is how our throughput compares to what we may expect from PS1.
     2
     3    subtracted background model: 2.776483 sec
     4    567 peaks: 2.350294 sec
     5    567 moments: 0.784404 sec
     6    identified 216 blended objects (0.006048 sec)
     7    rough classification (0.007589 sec)
     8    select psf model: 1.112221 sec
     9    built models: 0.005211 (567 objects)
     10    measure ensemble of PSFs: 1.903073 sec
     11    fit models: 5.739444 sec for 365 objects (77 psf, 33 ext, 255 failed, 202 skipped)
     12    replace models: 0.131781 sec (567 objects)
     13    measure ensemble of PSFs: 2.470944 sec
     14    measure full-frame aperture residual: 0.763284 sec
     15    measure magnitudes : 0.800974 sec for 567 objects (168 with apertures)
     16    replace background flux : 0.226746 sec
     17
     18    complete psphot run: 22.276232 sec
     19    extrapolation to GPC OTA: 66 sec
     20
     21    subtracted background model: 2.769444 sec
     22    1069 peaks: 2.345380 sec
     23    1069 moments: 1.478224 sec
     24    identified 515 blended objects (0.011470 sec)
     25    rough classification (0.008233 sec)
     26    select psf model: 1.326601 sec
     27    built models: 0.006923 (1069 objects)
     28    measure ensemble of PSFs: 2.135421 sec
     29    fit models: 7.566109 sec for 559 objects (206 psf, 51 ext, 302 failed, 510 skipped)
     30    replace models: 0.219286 sec (1069 objects)
     31    measure ensemble of PSFs: 2.849520 sec
     32    measure full-frame aperture residual: 0.942940 sec
     33    measure magnitudes : 1.222162 sec for 1069 objects (338 with apertures)
     34    replace background flux : 0.233185 sec
     35
     36    complete psphot run: 24.878902 sec
     37    extrapolation to GPC OTA: 75 sec
     38
     39    subtracted background model: 2.766679 sec
     40    2050 peaks: 2.326407 sec
     41    2005 moments: 2.521074 sec
     42    identified 519 blended objects (0.023435 sec)
     43    rough classification (0.010083 sec)
     44    select psf model: 1.410269 sec
     45    built models: 0.011972 (2005 objects)
     46    measure ensemble of PSFs: 2.791696 sec
     47    fit models: 10.465931 sec for 1114 objects (500 psf, 55 ext, 559 failed, 891 skipped)
     48    replace models: 0.437846 sec (2005 objects)
     49    measure ensemble of PSFs: 3.693040 sec
     50    measure full-frame aperture residual: 1.101108 sec
     51    measure magnitudes : 1.440022 sec for 2005 objects (478 with apertures)
     52    replace background flux : 0.226817 sec
     53
     54    complete psphot run: 30.939188 sec
     55    extrapolation to GPC OTA: 93 sec
     56
     57    subtracted background model: 2.746362 sec
     58    3331 peaks: 2.344337 sec
     59    3132 moments: 4.294272 sec
     60    identified 518 blended objects (0.036721 sec)
     61    rough classification (0.012682 sec)
     62    select psf model: 1.474402 sec
     63    built models: 0.019773 (3132 objects)
     64    measure ensemble of PSFs: 3.942925 sec
     65    fit models: 10.709155 sec for 1225 objects (617 psf, 55 ext, 553 failed, 1907 skipped)
     66    replace models: 0.846849 sec (3132 objects)
     67    measure ensemble of PSFs: 5.232133 sec
     68    measure full-frame aperture residual: 1.074216 sec
     69    measure magnitudes : 1.415196 sec for 3132 objects (471 with apertures)
     70    replace background flux : 0.227651 sec
     71
     72    complete psphot run: 36.642233 sec
     73
     74
     75    subtracted background model: 2.743184 sec
     76    26248 peaks: 2.483467 sec
     77    23121 moments: 36.205507 sec
     78    identified 519 blended objects (1.431448 sec)
     79    rough classification (0.048091 sec)
     80    select psf model: 1.322417 sec
     81    built models: 0.086170 (23121 objects)
     82    measure ensemble of PSFs: 13.673267 sec
     83    fit models: 11.082951 sec for 1271 objects (583 psf, 63 ext, 625 failed, 21850 skipped)
     84    replace models: 4.120838 sec (23121 objects)
     85    measure ensemble of PSFs: 17.712378 sec
     86    measure full-frame aperture residual: 0.994449 sec
     87    measure magnitudes : 1.465164 sec for 23121 objects (435 with apertures)
     88    replace background flux : 0.234465 sec
     89    complete psphot run: 96.495855 sec
     90
     91 major stages
     92
     93 background      2.8     2.8     2.8     2.7     2.7 (Npixels)
     94 peaks           2.4     2.3     2.3     2.3     2.5 (Npixels)
     95 moments         0.8     1.5     2.5     4.3    36.2 (not S/N limited)
     96 choose psf      1.1     1.3     1.4     1.5     1.3 (Nobjects, S/N limited)
     97 ensemble.1      1.9     2.1     2.8     3.9    13.7 (Nobjects)
     98 fit             5.7     7.6    10.5    10.7    11.1 (Nobjects, S/N limited)
     99 ensemble.2      2.5     2.8     3.7     5.2    17.7 (Nobjects)
     100 apresid         0.8     0.9     1.1     1.1     1.0 (Nobjects, S/N limited)
     101 mags            0.8     1.2     1.4     1.4     1.5 (Nobjects, partial S/N limit)
     102
     103 Npeaks:         567    1069    2050    3331   26248
     104 total:           22      25      31      37      96
     105
     106 insignificant
     107
     108 deblend  (~ 0.02s)
     109 classify (~ 0.01s)
     110 guess    (~ 0.01s)
     111 replace  (~ 0.44s)
     112
     113 fitting dt vs n:
     114 moments:  1.4ms/obj
     115 ensemble: 0.5ms/obj
     116 full fit: 5.8ms/obj
     117
     118Mark Pitts' analysis of 2MASS shows that we expect on average ~1500
     119sigma>25 sources and ~6200 sigma>5 sources per GPC chip, if we include
     120the 10^7 deg^-2 saturation limit.  Note that If I limit the moments analysis to
     121the brighter sources (all that is really needed), I can predict the
     122following timing for PS1 (scaling Npix by a factor of 3):
     123
     124 back: 8.1
     125 peak: 7.5
     126 mmnt: 2.1
     127 psf:  1.5
     128 ens1: 3.1
     129 fit:  8.7
     130 ens2: 3.5
     131 rest: 3.0
     132 I/O:  9.0
     133
     134 total: 46.5sec (one cpu)
     135
     136With our initial cluster of 16 boxes (64 cpus), we will be on the hairy edge of keeping up with the data if we are running at the full rate.  However, by the time the survey starts, we should have two sets of boxes, giving us about a factor of 2 headroom.  Though note that I'm ignoring any of the ''other'' steps of phase 2, not to mention any of the other survey modes.  On the other hand, I'm also ignoring night-time, weather, longer exposures, and any other overheads. Still, it sounds like we will be tight for the first part of the survey until we get the third set of boxes (~Apr 2008).