Index: trunk/ippTools/share/Makefile.am
===================================================================
--- trunk/ippTools/share/Makefile.am	(revision 28516)
+++ trunk/ippTools/share/Makefile.am	(revision 28536)
@@ -145,4 +145,5 @@
 	disttool_definebyquery_camera.sql \
 	disttool_definebyquery_chip.sql \
+	disttool_definebyquery_chip_bg.sql \
 	disttool_definebyquery_diff.sql \
 	disttool_definebyquery_fake.sql \
@@ -150,4 +151,5 @@
 	disttool_definebyquery_stack.sql \
 	disttool_definebyquery_warp.sql \
+	disttool_definebyquery_warp_bg.sql \
 	disttool_definebyquery_SSdiff.sql \
 	disttool_defineinterest.sql \
@@ -228,6 +230,8 @@
 	magicdstool_definebyquery_raw.sql \
 	magicdstool_definebyquery_chip.sql \
+	magicdstool_definebyquery_chip_bg.sql \
 	magicdstool_definebyquery_camera.sql \
 	magicdstool_definebyquery_warp.sql \
+	magicdstool_definebyquery_warp_bg.sql \
 	magicdstool_definebyquery_diff.sql \
 	magicdstool_definecopy_chip.sql \
Index: trunk/ippTools/share/disttool_definebyquery_chip_bg.sql
===================================================================
--- trunk/ippTools/share/disttool_definebyquery_chip_bg.sql	(revision 28536)
+++ trunk/ippTools/share/disttool_definebyquery_chip_bg.sql	(revision 28536)
@@ -0,0 +1,26 @@
+SELECT DISTINCT
+    'chip_bg' as stage,
+    chipBackgroundRun.chip_bg_id as stage_id,
+    chipBackgroundRun.magicked,
+    rawExp.exp_name as run_tag,
+    chipBackgroundRun.label,
+    chipBackgroundRun.data_group,
+    chipBackgroundRun.dist_group,
+    distTarget.target_id,
+    distTarget.clean
+FROM chipBackgroundRun
+JOIN chipRun USING(chip_id)
+JOIN rawExp USING(exp_id)
+JOIN distTarget
+    ON distTarget.stage = 'chip_bg'
+    AND chipBackgroundRun.dist_group = distTarget.dist_group
+    AND rawExp.filter = distTarget.filter
+JOIN rcInterest USING(target_id)
+LEFT JOIN distRun
+    ON distRun.stage_id = chipBackgroundRun.chip_bg_id
+    AND distRun.target_id = distTarget.target_id
+    -- JOIN hook %s
+WHERE distTarget.state = 'enabled'
+    AND rcInterest.state = 'enabled'
+    AND distRun.dist_id IS NULL      -- no existing distRun
+    AND ((chipBackgroundRun.state = 'full') OR (distTarget.clean AND chipBackgroundRun.state = 'cleaned'))
Index: trunk/ippTools/share/disttool_definebyquery_warp_bg.sql
===================================================================
--- trunk/ippTools/share/disttool_definebyquery_warp_bg.sql	(revision 28536)
+++ trunk/ippTools/share/disttool_definebyquery_warp_bg.sql	(revision 28536)
@@ -0,0 +1,30 @@
+SELECT DISTINCT
+    'warp_bg' as stage,
+    warpBackgroundRun.warp_bg_id AS stage_id,
+    warpBackgroundRun.magicked,
+    rawExp.exp_name as run_tag,
+    warpBackgroundRun.label,
+    warpBackgroundRun.data_group,
+    distTarget.dist_group,
+    distTarget.target_id,
+    distTarget.clean
+FROM warpBackgroundRun
+JOIN warpRun USING(warp_id)
+JOIN fakeRun USING(fake_id)
+JOIN camRun ON fakeRun.cam_id = camRun.cam_id
+JOIN chipRun USING(chip_id)
+JOIN rawExp USING(exp_id)
+JOIN distTarget
+    ON distTarget.stage = 'warp_bg'
+    AND warpBackgroundRun.dist_group = distTarget.dist_group
+    AND rawExp.filter = distTarget.filter
+JOIN rcInterest USING(target_id)
+LEFT JOIN distRun ON (distRun.stage_id = warp_bg_id)
+    AND distRun.target_id = distTarget.target_id
+WHERE  distTarget.state = 'enabled'
+    AND rcInterest.state = 'enabled'
+    AND distRun.dist_id IS NULL
+    AND ((warpBackgroundRun.state = 'full') OR (distTarget.clean AND warpBackgroundRun.state = 'cleaned'))
+
+
+
Index: trunk/ippTools/share/magicdstool_definebyquery_chip_bg.sql
===================================================================
--- trunk/ippTools/share/magicdstool_definebyquery_chip_bg.sql	(revision 28536)
+++ trunk/ippTools/share/magicdstool_definebyquery_chip_bg.sql	(revision 28536)
@@ -0,0 +1,33 @@
+SELECT DISTINCT       -- DISTINCT because we are going though diffInputSkyfile
+    magicRun.magic_id,
+    exp_id,
+    'chip_bg' AS stage,
+    chip_bg_id AS stage_id,
+    chipBackgroundRun.data_group,
+    camRun.cam_id,
+    magicRun.label,
+    magicRun.workdir,
+    CAST(NULL AS SIGNED) AS inv_magic_id,
+    CAST(NULL AS SIGNED) AS inv_exp_id
+FROM magicRun
+JOIN magicMask USING(magic_id)
+JOIN diffRun USING(diff_id)
+JOIN diffInputSkyfile USING(diff_id)
+JOIN warpRun
+    ON (!magicRun.inverse AND warp1 = warp_id)
+    OR ( magicRun.inverse AND warp2 = warp_id)
+JOIN fakeRun USING(fake_id)
+JOIN camRun USING(cam_id)
+JOIN chipRun USING(chip_id, exp_id)
+JOIN chipBackgroundRun USING(chip_id)
+JOIN rawExp USING(exp_id)
+LEFT JOIN magicDSRun
+    ON magicRun.magic_id = magicDSRun.magic_id
+    AND magicDSRun.stage = 'chip_bg'
+WHERE magicRun.state = 'full'
+    AND ( -- rerun HOOK magicdstool sends "\n1 " if rerun else "\n0 " %s
+    OR magicDSRun.magic_ds_id IS NULL)
+    AND chipBackgroundRun.magicked = 0
+    AND chipBackgroundRun.state = 'full'
+    AND camRun.state = 'full'
+
Index: trunk/ippTools/share/magicdstool_definebyquery_warp_bg.sql
===================================================================
--- trunk/ippTools/share/magicdstool_definebyquery_warp_bg.sql	(revision 28536)
+++ trunk/ippTools/share/magicdstool_definebyquery_warp_bg.sql	(revision 28536)
@@ -0,0 +1,32 @@
+SELECT DISTINCT       -- DISTINCT because we are going though diffInputSkyfile
+    magicRun.magic_id,
+    exp_id,
+    'warp_bg' AS stage,
+    warp_bg_id AS stage_id,
+    warpBackgroundRun.data_group,
+    0 AS cam_id,
+    magicRun.label,
+    magicRun.workdir,
+    CAST(NULL AS SIGNED) AS inv_magic_id,
+    CAST(NULL AS SIGNED) AS inv_exp_id
+FROM magicRun
+JOIN magicMask USING(magic_id)
+JOIN diffRun USING(diff_id)
+JOIN diffInputSkyfile USING(diff_id)
+JOIN warpRun
+    ON (!magicRun.inverse AND warp1 = warp_id)
+    OR ( magicRun.inverse AND warp2 = warp_id)
+JOIN warpBackgroundRun USING(warp_bg_id)
+JOIN fakeRun USING(fake_id)
+JOIN camRun USING(cam_id)
+JOIN chipRun USING(chip_id, exp_id)
+JOIN rawExp USING(exp_id)
+LEFT JOIN magicDSRun
+    ON magicRun.magic_id = magicDSRun.magic_id
+    AND magicDSRun.stage = 'warp_bg'
+WHERE magicRun.state = 'full'
+    AND ( -- rerun HOOK magicdstool sends "\n1 " if rerun else "\n0 " %s
+    OR magicDSRun.magic_ds_id IS NULL)
+    AND warpBackgroundRun.magicked  = 0
+    AND warpBackgroundRun.state = 'full'
+
Index: trunk/ippTools/src/disttool.c
===================================================================
--- trunk/ippTools/src/disttool.c	(revision 28516)
+++ trunk/ippTools/src/disttool.c	(revision 28536)
@@ -210,4 +210,20 @@
             psStringAppend(&query, " AND (chipRun.dist_group = '%s')", dist_group);
         }
+    } else if (!strcmp(stage, "chip_bg")) {
+        magicRunType = "chipBackgroundRun";
+        runJoinStr = "chipBackgroundRun.chip_bg_id";
+        query = pxDataGet("disttool_definebyquery_chip_bg.sql");
+        if (!query) {
+            psError(PXTOOLS_ERR_SYS, false, "failed to retreive SQL statement");
+            psFree(where);
+            return false;
+        }
+
+        if (label) {
+            psStringAppend(&query, " AND (chipBackgroundRun.label = '%s')", label);
+        }
+        if (dist_group) {
+            psStringAppend(&query, " AND (chipBackgroundRun.dist_group = '%s')", dist_group);
+        }
     } else if (!strcmp(stage, "camera")) {
         magicRunType = "camRun";    // This is used below to set the magicked business
@@ -258,4 +274,21 @@
         if (dist_group) {
             psStringAppend(&query, " AND (warpRun.dist_group = '%s')", dist_group);
+        }
+
+    } else if (!strcmp(stage, "warp_bg")) {
+        magicRunType = "warpBackgroundRun";
+        runJoinStr = "warpBackgroundRun.warp_bg_id";
+        query = pxDataGet("disttool_definebyquery_warp_bg.sql");
+        if (!query) {
+            psError(PXTOOLS_ERR_SYS, false, "failed to retreive SQL statement");
+            psFree(where);
+            return false;
+        }
+
+        if (label) {
+            psStringAppend(&query, " AND (warpBackgroundRun.label = '%s')", label);
+        }
+        if (dist_group) {
+            psStringAppend(&query, " AND (warpBackgroundRun.dist_group = '%s')", dist_group);
         }
 
Index: trunk/ippTools/src/magicdstool.c
===================================================================
--- trunk/ippTools/src/magicdstool.c	(revision 28516)
+++ trunk/ippTools/src/magicdstool.c	(revision 28536)
@@ -122,6 +122,8 @@
     PXOPT_COPY_S64(config->args, where, "-exp_id",  "exp_id", "==");
     PXOPT_COPY_S64(config->args, where, "-chip_id", "chip_id", "==");
+    PXOPT_COPY_S64(config->args, where, "-chip_bg_id", "chip_bg_id", "==");
     PXOPT_COPY_S64(config->args, where, "-cam_id",  "cam_id", "==");
     PXOPT_COPY_S64(config->args, where, "-warp_id", "warp_id", "==");
+    PXOPT_COPY_S64(config->args, where, "-warp_bg_id", "warp_bg_id", "==");
     PXOPT_COPY_S64(config->args, where, "-diff_id", "diff_id", "==");
     PXOPT_COPY_S64(config->args, where, "-magic_id","magicRun.magic_id", "==");
@@ -140,4 +142,7 @@
         query = pxDataGet("magicdstool_definebyquery_chip.sql");
         break;
+    case IPP_STAGE_CHIP_BG:
+        query = pxDataGet("magicdstool_definebyquery_chip_bg.sql");
+        break;
     case IPP_STAGE_CAMERA:
         query = pxDataGet("magicdstool_definebyquery_camera.sql");
@@ -145,4 +150,7 @@
     case IPP_STAGE_WARP:
         query = pxDataGet("magicdstool_definebyquery_warp.sql");
+        break;
+    case IPP_STAGE_WARP_BG:
+        query = pxDataGet("magicdstool_definebyquery_warp_bg.sql");
         break;
     case IPP_STAGE_DIFF:
@@ -720,4 +728,7 @@
         query = "UPDATE chipProcessedImfile SET magicked = %" PRId64 " where chip_id = %" PRId64 " AND class_id = '%s'";
         break;
+    case IPP_STAGE_CHIP_BG:
+        query = "UPDATE chipBackgroundImfile SET magicked = %" PRId64 " where chip_bg_id = %" PRId64 " AND class_id = '%s'";
+        break;
     case IPP_STAGE_CAMERA:
         // no there is no magicked column in camProcessedExp so we have nothing to do
@@ -727,4 +738,7 @@
         query = "UPDATE warpSkyfile SET magicked = %" PRId64 " where warp_id = %" PRId64 " AND skycell_id = '%s'";
         break;
+    case IPP_STAGE_WARP_BG:
+        query = "UPDATE warpBackgroundSkyfile SET magicked = %" PRId64 " where warp_bg_id = %" PRId64 " AND skycell_id = '%s'";
+        break;
     case IPP_STAGE_DIFF:
         query = "UPDATE diffSkyfile SET magicked = %" PRId64 " where diff_id = %" PRId64 " AND skycell_id = '%s'";
@@ -794,4 +808,7 @@
         query = "UPDATE chipRun SET magicked = %" PRId64 " where chip_id = %" PRId64;
         break;
+    case IPP_STAGE_CHIP_BG:
+        query = "UPDATE chipBackgroundRun SET magicked = %" PRId64 " where chip_bg_id = %" PRId64;
+        break;
     case IPP_STAGE_CAMERA:
         query = "UPDATE camRun SET magicked = %" PRId64 " where cam_id = %" PRId64;
@@ -799,4 +816,7 @@
     case IPP_STAGE_WARP:
         query = "UPDATE warpRun SET magicked = %" PRId64 " where warp_id = %" PRId64;
+        break;
+    case IPP_STAGE_WARP_BG:
+        query = "UPDATE warpBackgroundRun SET magicked = %" PRId64 " where warp_bg_id = %" PRId64;
         break;
     case IPP_STAGE_DIFF:
Index: trunk/ippTools/src/magicdstoolConfig.c
===================================================================
--- trunk/ippTools/src/magicdstoolConfig.c	(revision 28516)
+++ trunk/ippTools/src/magicdstoolConfig.c	(revision 28536)
@@ -60,6 +60,8 @@
     psMetadataAddS64(definebyqueryArgs, PS_LIST_TAIL, "-exp_id",   0, "search by exp_id", 0);
     psMetadataAddS64(definebyqueryArgs, PS_LIST_TAIL, "-chip_id",  0, "search by chip_id", 0);
+    psMetadataAddS64(definebyqueryArgs, PS_LIST_TAIL, "-chip_bg_id",  0, "search by chip_bg_id", 0);
     psMetadataAddS64(definebyqueryArgs, PS_LIST_TAIL, "-cam_id",  0, "search by cam_id", 0);
     psMetadataAddS64(definebyqueryArgs, PS_LIST_TAIL, "-warp_id",  0, "search by warp_id", 0);
+    psMetadataAddS64(definebyqueryArgs, PS_LIST_TAIL, "-warp_bg_id",  0, "search by warp_bg_id", 0);
     psMetadataAddS64(definebyqueryArgs, PS_LIST_TAIL, "-diff_id",  0, "search by diff_id", 0);
     psMetadataAddS64(definebyqueryArgs, PS_LIST_TAIL, "-magic_id", 0, "search by magic_id", 0);
