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Ignore:
Timestamp:
Jun 23, 2010, 2:36:55 PM (16 years ago)
Author:
eugene
Message:

merge changes from trunk (pauls fixes for loading pre-calculated psfs)

Location:
branches/eam_branches/ipp-20100621/psModules/src/objects
Files:
4 edited

Legend:

Unmodified
Added
Removed
  • branches/eam_branches/ipp-20100621/psModules/src/objects/pmPSF_IO.c

    r27531 r28440  
    174174    PS_ASSERT_PTR_NON_NULL(chip, false);
    175175
    176     if (!pmPSFmodelWrite(chip->analysis, view, file, config)) {
     176    // We need the readout as well, because that has the PSF analysis data (e.g., clumps)
     177    // There is only one, because photometry is done on chip-mosaicked data.
     178    pmFPAview *roView = pmFPAviewAlloc(0); // View to readout
     179    *roView = *view;
     180    roView->cell = 0;
     181    roView->readout = 0;
     182    pmReadout *ro = pmFPAviewThisReadout(roView, chip->parent); // Readout with analysis data
     183    psFree(roView);
     184    PM_ASSERT_READOUT_NON_NULL(ro, false);
     185
     186    if (!pmPSFmodelWrite(chip->analysis, ro->analysis, view, file, config)) {
    177187        psError(psErrorCodeLast(), false, "Failed to write PSF for chip");
    178188        return false;
     
    189199// else
    190200//   - psf table (+header) : FITS Table
    191 bool pmPSFmodelWrite (psMetadata *analysis, const pmFPAview *view,
     201bool pmPSFmodelWrite (const psMetadata *chipAnalysis, const psMetadata *roAnalysis, const pmFPAview *view,
    192202                      pmFPAfile *file, pmConfig *config)
    193203{
     
    198208    char *headName, *tableName, *residName;
    199209
    200     if (!analysis) {
     210    if (!chipAnalysis) {
    201211        psError(PM_ERR_PROG, true, "No analysis metadata for chip.");
     212        return false;
     213    }
     214    if (!roAnalysis) {
     215        psError(PM_ERR_PROG, true, "No analysis metadata for readout.");
    202216        return false;
    203217    }
     
    314328
    315329    // select the psf of interest
    316     pmPSF *psf = psMetadataLookupPtr (&status, analysis, "PSPHOT.PSF");
     330    pmPSF *psf = psMetadataLookupPtr (&status, chipAnalysis, "PSPHOT.PSF");
    317331    if (!psf) {
    318332        psError(PM_ERR_PROG, true, "missing PSF for this analysis metadata");
     
    346360
    347361        // we now save clump parameters for each region : need to save all of those
    348         int nRegions = psMetadataLookupS32 (&status, analysis, "PSF.CLUMP.NREGIONS");
     362        int nRegions = psMetadataLookupS32 (&status, roAnalysis, "PSF.CLUMP.NREGIONS");
    349363        psMetadataAddS32 (header, PS_LIST_TAIL, "PSF_CLN", PS_META_REPLACE, "number of psf clump regions", nRegions);
    350364        for (int i = 0; i < nRegions; i++) {
    351365            char regionName[64];
    352366            snprintf (regionName, 64, "PSF.CLUMP.REGION.%03d", i);
    353             psMetadata *regionMD = psMetadataLookupPtr (&status, analysis, regionName);
     367            psMetadata *regionMD = psMetadataLookupPtr (&status, roAnalysis, regionName);
    354368
    355369            psfClump.X  = psMetadataLookupF32 (&status, regionMD, "PSF.CLUMP.X");   assert (status);
     
    492506
    493507        // write the residuals as planes of the image
    494         psArray *images = psArrayAllocEmpty (1);
    495         psArrayAdd (images, 1, psf->residuals->Ro);  // z = 0 is Ro
     508        psArray *images = psArrayAllocEmpty (1);
     509        psArrayAdd (images, 1, psf->residuals->Ro);  // z = 0 is Ro
    496510
    497511        if (psf->residuals->Rx) {
    498512            psArrayAdd (images, 1, psf->residuals->Rx);
    499513            psArrayAdd (images, 1, psf->residuals->Ry);
    500         }
    501 
    502         // note that all N plane are implicitly of the same type, so we convert the mask
    503         if (psf->residuals->mask) {
    504             psImage *mask = psImageCopy (NULL, psf->residuals->mask, psf->residuals->Ro->type.type);
    505             psArrayAdd (images, 1, mask);
    506             psFree (mask);
    507         }
    508 
    509         // psFitsWriteImageCube (file->fits, header, images, residName);
    510         // psFree (images);
    511 
    512         if (!psFitsWriteImageCube (file->fits, header, images, residName)) {
     514        }
     515
     516        // note that all N plane are implicitly of the same type, so we convert the mask
     517        if (psf->residuals->mask) {
     518            psImage *mask = psImageCopy (NULL, psf->residuals->mask, psf->residuals->Ro->type.type);
     519            psArrayAdd (images, 1, mask);
     520            psFree (mask);
     521        }
     522
     523        // psFitsWriteImageCube (file->fits, header, images, residName);
     524        // psFree (images);
     525
     526        if (!psFitsWriteImageCube (file->fits, header, images, residName)) {
    513527            psError(psErrorCodeLast(), false, "Unable to write PSF residuals.");
    514528            psFree(images);
     
    728742    PS_ASSERT_PTR_NON_NULL(file->fpa, false);
    729743
    730     if (!pmPSFmodelRead (chip->analysis, view, file, config)) {
     744    // We need the readout as well, because that has the PSF analysis data (e.g., clumps)
     745    // There may be only one, because photometry is done on chip-mosaicked data.
     746    if (chip->cells->n != 1) {
     747        psError(PM_ERR_PROG, true, "Chip to receive PSF has %ld cells (should be only one)",
     748                chip->cells->n);
     749        return false;
     750    }
     751    pmCell *cell = chip->cells->data[0]; // Cell to receive PSF
     752    pmReadout *ro = NULL;                // Readout to receive PSF
     753    if (cell->readouts->n == 0) {
     754        ro = pmReadoutAlloc(cell);
     755        psFree(ro);                     // Drop reference
     756    } else if (cell->readouts->n != 1) {
     757        psError(PM_ERR_PROG, true, "Cell to receive PSF has %ld readouts (should be only one)",
     758                cell->readouts->n);
     759        return false;
     760    } else {
     761        ro = cell->readouts->data[0];
     762    }
     763    PM_ASSERT_READOUT_NON_NULL(ro, false);
     764    if (!ro->analysis) {
     765        ro->analysis = psMetadataAlloc();
     766    }
     767
     768    if (!pmPSFmodelRead(chip->analysis, ro->analysis, view, file, config)) {
    731769        psError(psErrorCodeLast(), false, "Failed to write PSF for chip");
    732770        return false;
     
    737775// for each Readout (ie, analysed image), we write out: header + table with PSF model parameters,
    738776// and header + image for the PSF residual images
    739 bool pmPSFmodelRead (psMetadata *analysis, const pmFPAview *view, pmFPAfile *file, const pmConfig *config)
     777bool pmPSFmodelRead (psMetadata *chipAnalysis, psMetadata *roAnalysis, const pmFPAview *view, pmFPAfile *file, const pmConfig *config)
    740778{
     779    PS_ASSERT_METADATA_NON_NULL(chipAnalysis, false);
     780    PS_ASSERT_METADATA_NON_NULL(roAnalysis, false);
    741781    PS_ASSERT_PTR_NON_NULL(view, false);
    742782    PS_ASSERT_PTR_NON_NULL(file, false);
     
    809849        char regionName[64];
    810850        snprintf (regionName, 64, "PSF.CLUMP.REGION.000");
    811         psMetadataAddS32 (analysis, PS_LIST_TAIL, "PSF.CLUMP.NREGIONS",  PS_META_REPLACE, "psf clump regions", 1);
    812 
    813         psMetadata *regionMD = psMetadataLookupPtr (&status, analysis, regionName);
     851        psMetadataAddS32 (roAnalysis, PS_LIST_TAIL, "PSF.CLUMP.NREGIONS",  PS_META_REPLACE, "psf clump regions", 1);
     852
     853        psMetadata *regionMD = psMetadataLookupPtr (&status, roAnalysis, regionName);
    814854        if (!regionMD) {
    815855            regionMD = psMetadataAlloc();
    816             psMetadataAddMetadata (analysis, PS_LIST_TAIL, regionName, PS_META_REPLACE, "psf clump region", regionMD);
     856            psMetadataAddMetadata (roAnalysis, PS_LIST_TAIL, regionName, PS_META_REPLACE, "psf clump region", regionMD);
    817857            psFree (regionMD);
    818858        }
     
    831871        psMetadataAddF32 (regionMD, PS_LIST_TAIL, "PSF.CLUMP.DY", PS_META_REPLACE, "psf clump center", psfClump.dY);
    832872    } else {
    833         psMetadataAddS32 (analysis, PS_LIST_TAIL, "PSF.CLUMP.NREGIONS",  PS_META_REPLACE, "psf clump regions", nRegions);
     873        psMetadataAddS32 (roAnalysis, PS_LIST_TAIL, "PSF.CLUMP.NREGIONS",  PS_META_REPLACE, "psf clump regions", nRegions);
    834874
    835875        for (int i = 0; i < nRegions; i++) {
     
    838878            snprintf (regionName, 64, "PSF.CLUMP.REGION.%03d", i);
    839879
    840             psMetadata *regionMD = psMetadataLookupPtr (&status, analysis, regionName);
     880            psMetadata *regionMD = psMetadataLookupPtr (&status, roAnalysis, regionName);
    841881            if (!regionMD) {
    842882                regionMD = psMetadataAlloc();
    843                 psMetadataAddMetadata (analysis, PS_LIST_TAIL, regionName, PS_META_REPLACE, "psf clump region", regionMD);
     883                psMetadataAddMetadata (roAnalysis, PS_LIST_TAIL, regionName, PS_META_REPLACE, "psf clump region", regionMD);
    844884                psFree (regionMD);
    845885            }
     
    10191059        }
    10201060
    1021         // note that all N plane are implicitly of the same type, so we convert the mask
    1022         psImage *mask = psImageCopy(NULL, psf->residuals->mask, psf->residuals->Ro->type.type);
    1023         psImageInit (psf->residuals->mask, 0);
    1024         psImageInit (psf->residuals->Rx, 0.0);
    1025         psImageInit (psf->residuals->Ry, 0.0);
    1026         switch (Nz) {
    1027           case 1: // Ro only
    1028             break;
    1029           case 2: // Ro and mask
     1061        // note that all N plane are implicitly of the same type, so we convert the mask
     1062        psImage *mask = psImageCopy(NULL, psf->residuals->mask, psf->residuals->Ro->type.type);
     1063        psImageInit (psf->residuals->mask, 0);
     1064        psImageInit (psf->residuals->Rx, 0.0);
     1065        psImageInit (psf->residuals->Ry, 0.0);
     1066        switch (Nz) {
     1067          case 1: // Ro only
     1068            break;
     1069          case 2: // Ro and mask
    10301070            if (!psFitsReadImageBuffer(mask, file->fits, fullImage, 1)) {
    10311071                psError(psErrorCodeLast(), false, "Unable to read PSF residual image.");
    10321072                return false;
    10331073            }
    1034             psImageCopy (psf->residuals->mask, mask, PM_TYPE_RESID_MASK);
    1035             break;
    1036           case 3: // Ro, Rx and Ry, no mask
     1074            psImageCopy (psf->residuals->mask, mask, PM_TYPE_RESID_MASK);
     1075            break;
     1076          case 3: // Ro, Rx and Ry, no mask
    10371077            if (!psFitsReadImageBuffer(psf->residuals->Rx, file->fits, fullImage, 1)) {
    10381078                psError(psErrorCodeLast(), false, "Unable to read PSF residual image.");
     
    10431083                return false;
    10441084            }
    1045             break;
    1046           case 4: // Ro, Rx, Ry, and mask:
     1085            break;
     1086          case 4: // Ro, Rx, Ry, and mask:
    10471087            if (!psFitsReadImageBuffer(psf->residuals->Rx, file->fits, fullImage, 1)) {
    10481088                psError(psErrorCodeLast(), false, "Unable to read PSF residual image.");
     
    10571097                return false;
    10581098            }
    1059             psImageCopy (psf->residuals->mask, mask, PM_TYPE_RESID_MASK);
    1060             break;
    1061         }
    1062         psFree (mask);
    1063     }
    1064 
    1065     psMetadataAdd (analysis, PS_LIST_TAIL, "PSPHOT.PSF",     PS_DATA_UNKNOWN,  "psphot psf", psf);
     1099            psImageCopy (psf->residuals->mask, mask, PM_TYPE_RESID_MASK);
     1100            break;
     1101        }
     1102        psFree (mask);
     1103    }
     1104
     1105    psMetadataAdd (chipAnalysis, PS_LIST_TAIL, "PSPHOT.PSF",     PS_DATA_UNKNOWN,  "psphot psf", psf);
    10661106    psFree (psf);
    10671107
  • branches/eam_branches/ipp-20100621/psModules/src/objects/pmPSF_IO.h

    r18601 r28440  
    2020bool pmPSFmodelWriteFPA (pmFPA *fpa, const pmFPAview *view, pmFPAfile *file, pmConfig *config);
    2121bool pmPSFmodelWriteChip (pmChip *chip, const pmFPAview *view, pmFPAfile *file, pmConfig *config);
    22 bool pmPSFmodelWrite (psMetadata *analysis, const pmFPAview *view, pmFPAfile *file, pmConfig *config);
     22bool pmPSFmodelWrite (const psMetadata *chipAnalysis, const psMetadata *roAnalysis, const pmFPAview *view, pmFPAfile *file, pmConfig *config);
    2323
    2424bool pmPSFmodelWritePHU (const pmFPAview *view, pmFPAfile *file, pmConfig *config);
     
    2727bool pmPSFmodelReadFPA (pmFPA *fpa, const pmFPAview *view, pmFPAfile *file, const pmConfig *config);
    2828bool pmPSFmodelReadChip (pmChip *chip, const pmFPAview *view, pmFPAfile *file, const pmConfig *config);
    29 bool pmPSFmodelRead (psMetadata *analysis, const pmFPAview *view, pmFPAfile *file, const pmConfig *config);
     29bool pmPSFmodelRead (psMetadata *chipAnalysis, psMetadata *roAnalysis, const pmFPAview *view, pmFPAfile *file, const pmConfig *config);
    3030
    3131bool pmPSFmodelCheckDataStatusForView (const pmFPAview *view, const pmFPAfile *file);
  • branches/eam_branches/ipp-20100621/psModules/src/objects/pmSourcePhotometry.c

    r27531 r28440  
    107107        // the source peak pixel is guaranteed to be on the image, and only minimally different from the source center
    108108        double fluxScale = pmTrend2DEval (psf->FluxScale, (float)source->peak->x, (float)source->peak->y);
    109         psAssert (isfinite(fluxScale), "how can the flux scale be invalid? source at %d, %d\n", source->peak->x, source->peak->y);
    110         psAssert (fluxScale > 0.0, "how can the flux scale be negative? source at %d, %d\n", source->peak->x, source->peak->y);
    111         source->psfFlux = fluxScale * source->modelPSF->params->data.F32[PM_PAR_I0];
    112         source->psfFluxErr = fluxScale * source->modelPSF->dparams->data.F32[PM_PAR_I0];
    113         source->psfMag = -2.5*log10(source->psfFlux);
     109        psAssert (isfinite(fluxScale), "how can the flux scale be invalid? source at %d, %d\n", source->peak->x, source->peak->y);
     110        psAssert (fluxScale > 0.0, "how can the flux scale be negative? source at %d, %d\n", source->peak->x, source->peak->y);
     111        source->psfFlux = fluxScale * source->modelPSF->params->data.F32[PM_PAR_I0];
     112        source->psfFluxErr = fluxScale * source->modelPSF->dparams->data.F32[PM_PAR_I0];
     113        source->psfMag = -2.5*log10(source->psfFlux);
    114114    } else {
    115115        status = pmSourcePhotometryModel (&source->psfMag, &source->psfFlux, source->modelPSF);
    116         source->psfFluxErr = source->psfFlux * (source->modelPSF->dparams->data.F32[PM_PAR_I0] / source->modelPSF->params->data.F32[PM_PAR_I0]);
     116        source->psfFluxErr = source->psfFlux * (source->modelPSF->dparams->data.F32[PM_PAR_I0] / source->modelPSF->params->data.F32[PM_PAR_I0]);
    117117    }
    118118
     
    120120    if (source->modelFits) {
    121121        bool foundEXT = false;
    122         for (int i = 0; i < source->modelFits->n; i++) {
    123             pmModel *model = source->modelFits->data[i];
    124             status = pmSourcePhotometryModel (&model->mag, NULL, model);
    125             if (model == source->modelEXT) foundEXT = true;
    126         }
    127         if (foundEXT) {
    128             source->extMag = source->modelEXT->mag;
    129         } else {
    130             status = pmSourcePhotometryModel (&source->extMag, NULL, source->modelEXT);
    131         }
     122        for (int i = 0; i < source->modelFits->n; i++) {
     123            pmModel *model = source->modelFits->data[i];
     124            status = pmSourcePhotometryModel (&model->mag, NULL, model);
     125            if (model == source->modelEXT) foundEXT = true;
     126        }
     127        if (foundEXT) {
     128            source->extMag = source->modelEXT->mag;
     129        } else {
     130            status = pmSourcePhotometryModel (&source->extMag, NULL, source->modelEXT);
     131        }
    132132    } else {
    133         if (source->modelEXT) {
    134             status = pmSourcePhotometryModel (&source->extMag, NULL, source->modelEXT);
    135         }
     133        if (source->modelEXT) {
     134            status = pmSourcePhotometryModel (&source->extMag, NULL, source->modelEXT);
     135        }
    136136    }
    137137
     
    204204        }
    205205        if (mode & PM_SOURCE_PHOT_APCORR) {
    206             // XXX this should be removed -- we no longer fit for the 'sky bias'
     206            // XXX this should be removed -- we no longer fit for the 'sky bias'
    207207            rflux   = pow (10.0, 0.4*source->psfMag);
    208208            source->apMag -= PS_SQR(source->apRadius)*rflux * psf->skyBias + psf->skySat / rflux;
     
    236236    flux = model->modelFlux (model->params);
    237237    if (flux > 0) {
    238         mag = -2.5*log10(flux);
     238        mag = -2.5*log10(flux);
    239239    }
    240240    if (fitMag) {
    241         *fitMag = mag;
     241        *fitMag = mag;
    242242    }
    243243    if (fitFlux) {
    244         *fitFlux = flux;
     244        *fitFlux = flux;
    245245    }
    246246
     
    380380
    381381    if (source->diffStats == NULL) {
    382         source->diffStats = pmSourceDiffStatsAlloc();
     382        source->diffStats = pmSourceDiffStatsAlloc();
    383383    }
    384384
     
    388388    int   nMask = 0;
    389389    int   nBad  = 0;
    390    
     390
    391391    psImage *flux     = source->pixels;
    392392    psImage *variance = source->variance;
     
    394394
    395395    for (int iy = 0; iy < flux->numRows; iy++) {
    396         for (int ix = 0; ix < flux->numCols; ix++) {
     396        for (int ix = 0; ix < flux->numCols; ix++) {
    397397            if (mask->data.PS_TYPE_IMAGE_MASK_DATA[iy][ix] & maskVal) {
    398                 nMask ++;
    399                 continue;
    400             }
    401 
    402             float SN = flux->data.F32[iy][ix] / sqrt(variance->data.F32[iy][ix]);
    403 
    404             if (SN > +FLUX_LIMIT) {
    405                 nGood ++;
    406                 fGood += fabs(flux->data.F32[iy][ix]);
    407             }
    408 
    409             if (SN < -FLUX_LIMIT) {
    410                 nBad ++;
    411                 fBad += fabs(flux->data.F32[iy][ix]);
    412             }
    413         }
     398                nMask ++;
     399                continue;
     400            }
     401
     402            float SN = flux->data.F32[iy][ix] / sqrt(variance->data.F32[iy][ix]);
     403
     404            if (SN > +FLUX_LIMIT) {
     405                nGood ++;
     406                fGood += fabs(flux->data.F32[iy][ix]);
     407            }
     408
     409            if (SN < -FLUX_LIMIT) {
     410                nBad ++;
     411                fBad += fabs(flux->data.F32[iy][ix]);
     412            }
     413        }
    414414    }
    415415
    416416    source->diffStats->nGood      = nGood;
    417     source->diffStats->fRatio     = (fGood + fBad         == 0.0) ? NAN : fGood / (fGood + fBad);         
    418     source->diffStats->nRatioBad  = (nGood + nBad         == 0)   ? NAN : nGood / (float) (nGood + nBad);         
    419     source->diffStats->nRatioMask = (nGood + nMask        == 0)   ? NAN : nGood / (float) (nGood + nMask);         
     417    source->diffStats->fRatio     = (fGood + fBad         == 0.0) ? NAN : fGood / (fGood + fBad);
     418    source->diffStats->nRatioBad  = (nGood + nBad         == 0)   ? NAN : nGood / (float) (nGood + nBad);
     419    source->diffStats->nRatioMask = (nGood + nMask        == 0)   ? NAN : nGood / (float) (nGood + nMask);
    420420    source->diffStats->nRatioAll  = (nGood + nMask + nBad == 0)   ? NAN : nGood / (float) (nGood + nMask + nBad);
    421421
     
    628628        }
    629629    }
    630     model->nPix = Npix; 
     630    model->nPix = Npix;
    631631    model->nDOF = Npix - 1;
    632632    model->chisq = dC;
     
    636636
    637637
    638 double pmSourceModelWeight(const pmSource *Mi, int term, const bool unweighted_sum, const float covarFactor)
     638double pmSourceModelWeight(const pmSource *Mi, int term, const bool unweighted_sum, const float covarFactor, psImageMaskType maskVal)
    639639{
    640640    PS_ASSERT_PTR_NON_NULL(Mi, NAN);
     
    652652    for (int yi = 0; yi < Pi->numRows; yi++) {
    653653        for (int xi = 0; xi < Pi->numCols; xi++) {
    654             if (Ti->data.PS_TYPE_IMAGE_MASK_DATA[yi][xi])
     654            if (Ti->data.PS_TYPE_IMAGE_MASK_DATA[yi][xi] & maskVal)
    655655                continue;
    656656            if (!unweighted_sum) {
     
    684684}
    685685
    686 double pmSourceModelDotModel (const pmSource *Mi, const pmSource *Mj, const bool unweighted_sum, const float covarFactor)
     686double pmSourceModelDotModel (const pmSource *Mi, const pmSource *Mj, const bool unweighted_sum, const float covarFactor, psImageMaskType maskVal)
    687687{
    688688    PS_ASSERT_PTR_NON_NULL(Mi, NAN);
     
    727727    for (yi = yIs, yj = yJs; yi < yIe; yi++, yj++) {
    728728        for (xi = xIs, xj = xJs; xi < xIe; xi++, xj++) {
    729             if (Ti->data.PS_TYPE_IMAGE_MASK_DATA[yi][xi])
    730                 continue;
    731             if (Tj->data.PS_TYPE_IMAGE_MASK_DATA[yj][xj])
     729            if (Ti->data.PS_TYPE_IMAGE_MASK_DATA[yi][xi] & maskVal)
     730                continue;
     731            if (Tj->data.PS_TYPE_IMAGE_MASK_DATA[yj][xj] & maskVal)
    732732                continue;
    733733
     
    746746}
    747747
    748 double pmSourceDataDotModel (const pmSource *Mi, const pmSource *Mj, const bool unweighted_sum, const float covarFactor)
     748double pmSourceDataDotModel (const pmSource *Mi, const pmSource *Mj, const bool unweighted_sum, const float covarFactor, psImageMaskType maskVal)
    749749{
    750750    PS_ASSERT_PTR_NON_NULL(Mi, NAN);
     
    789789    for (yi = yIs, yj = yJs; yi < yIe; yi++, yj++) {
    790790        for (xi = xIs, xj = xJs; xi < xIe; xi++, xj++) {
    791             if (Ti->data.PS_TYPE_IMAGE_MASK_DATA[yi][xi])
    792                 continue;
    793             if (Tj->data.PS_TYPE_IMAGE_MASK_DATA[yj][xj])
     791            if (Ti->data.PS_TYPE_IMAGE_MASK_DATA[yi][xi] & maskVal)
     792                continue;
     793            if (Tj->data.PS_TYPE_IMAGE_MASK_DATA[yj][xj] & maskVal)
    794794                continue;
    795795
  • branches/eam_branches/ipp-20100621/psModules/src/objects/pmSourcePhotometry.h

    r27531 r28440  
    4848    psImage *image,                     ///< image pixels to be used
    4949    psImage *mask,                      ///< mask of pixels to ignore
    50     psImageMaskType maskVal             ///< Value to mask
     50    psImageMaskType maskVal             ///< Value to mask
    5151);
    5252
     
    5858bool pmSourceMeasureDiffStats (pmSource *source, psImageMaskType maskVal);
    5959
    60 double pmSourceDataDotModel (const pmSource *Mi, const pmSource *Mj, const bool unweighted_sum, const float covarFactor);
    61 double pmSourceModelDotModel (const pmSource *Mi, const pmSource *Mj, const bool unweighted_sum, const float covarFactor);
    62 double pmSourceModelWeight(const pmSource *Mi, int term, const bool unweighted_sum, const float covarFactor);
     60double pmSourceDataDotModel (const pmSource *Mi, const pmSource *Mj, const bool unweighted_sum, const float covarFactor, psImageMaskType maskVal);
     61double pmSourceModelDotModel (const pmSource *Mi, const pmSource *Mj, const bool unweighted_sum, const float covarFactor, psImageMaskType maskVal);
     62double pmSourceModelWeight(const pmSource *Mi, int term, const bool unweighted_sum, const float covarFactor, psImageMaskType maskVal);
    6363
    6464// retire these:
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