Index: branches/pap/ppStack/src/ppStackSetup.c
===================================================================
--- branches/pap/ppStack/src/ppStackSetup.c	(revision 25805)
+++ branches/pap/ppStack/src/ppStackSetup.c	(revision 25824)
@@ -48,8 +48,20 @@
     // Original images
     options->origImages = psArrayAlloc(num);
+    options->origMasks = psArrayAlloc(num);
+    options->origVariances = psArrayAlloc(num);
     pmFPAview *view = pmFPAviewAlloc(0);
     for (int i = 0; i < num; i++) {
-        pmFPAfile *file = pmFPAfileSelectSingle(config->files, "PPSTACK.INPUT", i); // File of interest
-        options->origImages->data[i] = pmFPAfileName(file, view, config);
+        {
+            pmFPAfile *file = pmFPAfileSelectSingle(config->files, "PPSTACK.INPUT", i);
+            options->origImages->data[i] = pmFPAfileName(file, view, config);
+        }
+        {
+            pmFPAfile *file = pmFPAfileSelectSingle(config->files, "PPSTACK.INPUT.MASK", i);
+            options->origMasks->data[i] = pmFPAfileName(file, view, config);
+        }
+        {
+            pmFPAfile *file = pmFPAfileSelectSingle(config->files, "PPSTACK.INPUT.VARIANCE", i);
+            options->origVariances->data[i] = pmFPAfileName(file, view, config);
+        }
     }
     psFree(view);